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Merge pull request #2110 from penpot/niwinz-scripts-and-fixes

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Scripts & Fixes
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Pablo Alba 2022-07-27 13:13:34 +02:00 committed by GitHub
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8 changed files with 304 additions and 216 deletions
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114
backend/dev/script-fix-sobjects.clj Normal file
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@ -0,0 +1,114 @@
;; This Source Code Form is subject to the terms of the Mozilla Public
;; License, v. 2.0. If a copy of the MPL was not distributed with this
;; file, You can obtain one at http://mozilla.org/MPL/2.0/.
;;
;; Copyright (c) UXBOX Labs SL
;; This is an example on how it can be executed:
;; clojure -Scp $(cat classpath) -M dev/script-fix-sobjects.clj
(require
'[app.common.logging :as l]
'[app.common.data :as d]
'[app.common.pprint]
'[app.db :as db]
'[app.storage :as sto]
'[app.storage.impl :as impl]
'[app.util.time :as dt]
'[integrant.core :as ig])
;; --- HELPERS
(l/info :hint "initializing script" :args *command-line-args*)
(def noop? (some #(= % "noop") *command-line-args*))
(def chunk-size 10)
(def sql:retrieve-sobjects-chunk
"SELECT * FROM storage_object
WHERE created_at < ? AND deleted_at is NULL
ORDER BY created_at desc LIMIT ?")
(defn get-chunk
[conn cursor]
(let [rows (db/exec! conn [sql:retrieve-sobjects-chunk cursor chunk-size])]
[(some->> rows peek :created-at) (seq rows)]))
(defn get-candidates
[conn]
(->> (d/iteration (partial get-chunk conn)
:vf second
:kf first
:initk (dt/now))
(sequence cat)))
(def modules
[:app.db/pool
:app.storage/storage
[:app.main/default :app.worker/executor]
[:app.main/assets :app.storage.s3/backend]
[:app.main/assets :app.storage.fs/backend]])
(def system
(let [config (select-keys app.main/system-config modules)
config (-> config
(assoc :app.migrations/all {})
(assoc :app.metrics/metrics nil))]
(ig/load-namespaces config)
(-> config ig/prep ig/init)))
(defn update-fn
[{:keys [conn] :as storage} {:keys [id backend] :as row}]
(cond
(= backend "s3")
(do
(l/info :hint "rename storage object backend"
:id id
:from-backend backend
:to-backend :assets-s3)
(assoc row :backend "assets-s3"))
(= backend "assets-s3")
(do
(l/info :hint "ignoring storage object" :id id :backend backend)
nil)
(or (= backend "fs")
(= backend "assets-fs"))
(let [sobj (sto/row->storage-object row)
path (-> (sto/get-object-path storage sobj) deref)]
(l/info :hint "change storage object backend"
:id id
:from-backend backend
:to-backend :assets-s3)
(when-not noop?
(-> (impl/resolve-backend storage :assets-s3)
(impl/put-object sobj (sto/content path))
(deref)))
(assoc row :backend "assets-s3"))
:else
(throw (IllegalArgumentException. "unexpected backend found"))))
(try
(db/with-atomic [conn (:app.db/pool system)]
(let [storage (:app.storage/storage system)
storage (assoc storage :conn conn)]
(loop [items (get-candidates conn)]
(when-let [item (first items)]
(when-let [{:keys [id] :as row} (update-fn storage item)]
(db/update! conn :storage-object (dissoc row :id) {:id (:id item)}))
(recur (rest items))))
(when noop?
(throw (ex-info "explicit rollback" {})))))
(catch Throwable cause
(cond
(= "explicit rollback" (ex-message cause))
(l/warn :hint "transaction aborted")
:else
(l/error :hint "unexpected exception" :cause cause))))
(ig/halt! system)
(System/exit 0)

9
backend/src/app/migrations.clj
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@ -6,7 +6,7 @@
(ns app.migrations
(:require
[app.migrations.migration-0023 :as mg0023]
[app.migrations.clj.migration-0023 :as mg0023]
[app.util.migrations :as mg]
[integrant.core :as ig]))
@ -228,13 +228,16 @@
:fn (mg/resource "app/migrations/sql/0072-mod-file-object-thumbnail-table.sql")}
{:name "0073-mod-file-media-object-constraints"
:fn (mg/resource "app/migrations/sql/0073-mod-file-media-object-constraints.sql")}
:fn (mg/resource "app/migrations/sql/0073-mod-file-media-object-constraints.sql")}
{:name "0074-mod-file-library-rel-constraints"
:fn (mg/resource "app/migrations/sql/0074-mod-file-library-rel-constraints.sql")}
{:name "0075-mod-share-link-table"
:fn (mg/resource "app/migrations/sql/0075-mod-share-link-table.sql")}
{:name "0076-mod-storage-object-table"
:fn (mg/resource "app/migrations/sql/0076-mod-storage-object-table.sql")}
])

2
backend/src/app/migrations/migration_0023.clj → backend/src/app/migrations/clj/migration_0023.clj
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@ -4,7 +4,7 @@
;;
;; Copyright (c) UXBOX Labs SL
(ns app.migrations.migration-0023
(ns app.migrations.clj.migration-0023
(:require
[app.db :as db]
[app.util.blob :as blob]))

10
backend/src/app/migrations/sql/0076-mod-storage-object-table.sql Normal file
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@ -0,0 +1,10 @@
-- Renames the old, already deprecated backend name with new one on
-- all storage object rows.
UPDATE storage_object
SET backend = 'assets-fs'
WHERE backend = 'fs';
UPDATE storage_object
SET backend = 'assets-s3'
WHERE backend = 's3';

14
backend/src/app/srepl/dev.clj
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@ -1,14 +0,0 @@
(ns app.srepl.dev
#_:clj-kondo/ignore
(:require
[app.db :as db]
[app.config :as cfg]
[app.rpc.commands.auth :refer [derive-password]]
[app.main :refer [system]]))
(defn reset-passwords
[system]
(db/with-atomic [conn (:app.db/pool system)]
(let [password (derive-password "123123")]
(db/exec! conn ["update profile set password=?" password]))))

43
backend/src/app/srepl/fixes.clj Normal file
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@ -0,0 +1,43 @@
;; This Source Code Form is subject to the terms of the Mozilla Public
;; License, v. 2.0. If a copy of the MPL was not distributed with this
;; file, You can obtain one at http://mozilla.org/MPL/2.0/.
;;
;; Copyright (c) UXBOX Labs SL
(ns app.srepl.fixes
"A collection of adhoc fixes scripts."
(:require
[app.common.logging :as l]
[app.common.uuid :as uuid]
[app.srepl.helpers :as h]))
(defn repair-orphaned-shapes
"There are some shapes whose parent has been deleted. This function
detects them and puts them as children of the root node."
([data]
(letfn [(is-orphan? [shape objects]
(and (some? (:parent-id shape))
(nil? (get objects (:parent-id shape)))))
(update-page [page]
(let [objects (:objects page)
orphans (into #{} (filter #(is-orphan? % objects)) (vals objects))]
(if (seq orphans)
(do
(l/info :hint "found a file with orphans" :file-id (:id data) :broken-shapes (count orphans))
(-> page
(h/update-shapes (fn [shape]
(if (contains? orphans shape)
(assoc shape :parent-id uuid/zero)
shape)))
(update-in [:objects uuid/zero :shapes] into (map :id) orphans)))
page)))]
(h/update-pages data update-page)))
;; special arity for to be called from h/analyze-files to search for
;; files with possible issues
([file state]
(repair-orphaned-shapes (:data file))
(update state :total (fnil inc 0))))

120
backend/src/app/srepl/helpers.clj Normal file
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@ -0,0 +1,120 @@
;; This Source Code Form is subject to the terms of the Mozilla Public
;; License, v. 2.0. If a copy of the MPL was not distributed with this
;; file, You can obtain one at http://mozilla.org/MPL/2.0/.
;;
;; Copyright (c) UXBOX Labs SL
(ns app.srepl.helpers
"A main namespace for server repl."
#_:clj-kondo/ignore
(:require
[app.common.data :as d]
[app.common.exceptions :as ex]
[app.common.logging :as l]
[app.common.pages :as cp]
[app.common.pages.migrations :as pmg]
[app.common.pprint :refer [pprint]]
[app.common.spec :as us]
[app.common.uuid :as uuid]
[app.config :as cfg]
[app.db :as db]
[app.db.sql :as sql]
[app.main :refer [system]]
[app.rpc.commands.auth :refer [derive-password]]
[app.rpc.queries.profile :as prof]
[app.util.blob :as blob]
[app.util.time :as dt]
[clojure.spec.alpha :as s]
[clojure.walk :as walk]
[cuerdas.core :as str]
[expound.alpha :as expound]))
(defn reset-password!
"Reset a password to a specific one for a concrete user or all users
if email is `:all` keyword."
[system & {:keys [email password] :or {password "123123"} :as params}]
(us/verify! (contains? params :email) "`email` parameter is mandatory")
(db/with-atomic [conn (:app.db/pool system)]
(let [password (derive-password password)]
(if (= email :all)
(db/exec! conn ["update profile set password=?" password])
(let [email (str/lower email)]
(db/exec! conn ["update profile set password=? where email=?" password email]))))))
(defn reset-file-data!
"Hardcode replace of the data of one file."
[system id data]
(db/with-atomic [conn (:app.db/pool system)]
(db/update! conn :file
{:data data}
{:id id})))
(defn get-file
"Get the migrated data of one file."
[system id]
(-> (:app.db/pool system)
(db/get-by-id :file id)
(update :data blob/decode)
(update :data pmg/migrate-data)))
(defn update-file!
"Apply a function to the data of one file. Optionally save the changes or not.
The function receives the decoded and migrated file data."
[system & {:keys [update-fn id save? migrate? inc-revn?]
:or {save? false migrate? true inc-revn? true}}]
(db/with-atomic [conn (:app.db/pool system)]
(let [file (db/get-by-id conn :file id {:for-update true})
file (-> file
(update :data blob/decode)
(cond-> migrate? (update :data pmg/migrate-data))
(update :data update-fn)
(update :data blob/encode)
(cond-> inc-revn? (update :revn inc)))]
(when save?
(db/update! conn :file
{:data (:data file)
:revn (:revn file)}
{:id (:id file)}))
(update file :data blob/decode))))
(def ^:private sql:retrieve-files-chunk
"SELECT id, name, modified_at, data FROM file
WHERE created_at < ? AND deleted_at is NULL
ORDER BY created_at desc LIMIT ?")
(defn analyze-files
"Apply a function to all files in the database, reading them in
batches. Do not change data.
The `on-file` parameter should be a function that receives the file
and the previous state and returns the new state."
[system {:keys [chunk-size on-file] :or {chunk-size 10}}]
(letfn [(get-chunk [conn cursor]
(let [rows (db/exec! conn [sql:retrieve-files-chunk cursor chunk-size])]
[(some->> rows peek :created-at) (seq rows)]))
(get-candidates [conn]
(->> (d/iteration (partial get-chunk conn)
:vf second
:kf first
:initk (dt/now))
(sequence cat)
(map #(update % :data blob/decode))))]
(db/with-atomic [conn (:app.db/pool system)]
(loop [state {}
files (get-candidates conn)]
(if-let [file (first files)]
(let [state (on-file file state)]
(recur state (rest files)))
state)))))
(defn update-pages
"Apply a function to all pages of one file. The function receives a page and returns an updated page."
[data f]
(update data :pages-index d/update-vals f))
(defn update-shapes
"Apply a function to all shapes of one page The function receives a shape and returns an updated shape"
[page f]
(update page :objects d/update-vals f))

208
backend/src/app/srepl/main.clj
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@ -1,203 +1,15 @@
;; This Source Code Form is subject to the terms of the Mozilla Public
;; License, v. 2.0. If a copy of the MPL was not distributed with this
;; file, You can obtain one at http://mozilla.org/MPL/2.0/.
;;
;; Copyright (c) UXBOX Labs SL
(ns app.srepl.main
"A main namespace for server repl."
"A collection of adhoc fixes scripts."
#_:clj-kondo/ignore
(:require
[app.common.data :as d]
[app.common.exceptions :as ex]
[app.common.logging :as l]
[app.common.pages :as cp]
[app.common.pages.migrations :as pmg]
[app.common.uuid :as uuid]
[app.config :as cfg]
[app.db :as db]
[app.db.sql :as sql]
[app.main :refer [system]]
[app.rpc.queries.profile :as prof]
[app.srepl.dev :as dev]
[app.util.blob :as blob]
[app.util.time :as dt]
[clojure.spec.alpha :as s]
[clojure.walk :as walk]
[cuerdas.core :as str]
[expound.alpha :as expound]
[fipp.edn :refer [pprint]]))
;; ==== Utility functions
(defn reset-file-data
"Hardcode replace of the data of one file."
[system id data]
(db/with-atomic [conn (:app.db/pool system)]
(db/update! conn :file
{:data data}
{:id id})))
(defn get-file
"Get the migrated data of one file."
[system id]
(-> (:app.db/pool system)
(db/get-by-id :file id)
(update :data app.util.blob/decode)
(update :data pmg/migrate-data)))
(defn duplicate-file
"This is a raw version of duplication of file just only for forensic analysis."
[system file-id email]
(db/with-atomic [conn (:app.db/pool system)]
(when-let [profile (some->> (prof/retrieve-profile-data-by-email conn (str/lower email))
(prof/populate-additional-data conn))]
(when-let [file (db/exec-one! conn (sql/select :file {:id file-id}))]
(let [params (assoc file
:id (uuid/next)
:project-id (:default-project-id profile))]
(db/insert! conn :file params)
(:id file))))))
(defn update-file
"Apply a function to the data of one file. Optionally save the changes or not.
The function receives the decoded and migrated file data."
([system id f] (update-file system id f false))
([system id f save?]
(db/with-atomic [conn (:app.db/pool system)]
(let [file (db/get-by-id conn :file id {:for-update true})
file (-> file
(update :data app.util.blob/decode)
(update :data pmg/migrate-data)
(update :data f)
(update :data blob/encode)
(update :revn inc))]
(when save?
(db/update! conn :file
{:data (:data file)}
{:id (:id file)}))
(update file :data blob/decode)))))
(defn analyze-files
"Apply a function to all files in the database, reading them in batches. Do not change data.
The function receives an object with some properties of the file and the decoded data, and
an empty atom where it may accumulate statistics, if desired."
[system {:keys [sleep chunk-size max-chunks on-file]
:or {sleep 1000 chunk-size 10 max-chunks ##Inf}}]
(let [stats (atom {})]
(letfn [(retrieve-chunk [conn cursor]
(let [sql (str "select id, name, modified_at, data from file "
" where modified_at < ? and deleted_at is null "
" order by modified_at desc limit ?")]
(->> (db/exec! conn [sql cursor chunk-size])
(map #(update % :data blob/decode)))))
(process-chunk [chunk]
(loop [files chunk]
(when-let [file (first files)]
(on-file file stats)
(recur (rest files)))))]
(db/with-atomic [conn (:app.db/pool system)]
(loop [cursor (dt/now)
chunks 0]
(when (< chunks max-chunks)
(let [chunk (retrieve-chunk conn cursor)]
(when-not (empty? chunk)
(let [cursor (-> chunk last :modified-at)]
(process-chunk chunk)
(Thread/sleep (inst-ms (dt/duration sleep)))
(recur cursor (inc chunks)))))))
@stats))))
(defn update-pages
"Apply a function to all pages of one file. The function receives a page and returns an updated page."
[data f]
(update data :pages-index d/update-vals f))
(defn update-shapes
"Apply a function to all shapes of one page The function receives a shape and returns an updated shape"
[page f]
(update page :objects d/update-vals f))
;; ==== Specific fixes
(defn repair-orphaned-shapes
"There are some shapes whose parent has been deleted. This
function detects them and puts them as children of the root node."
([file _] ; to be called from analyze-files to search for files with the problem
(repair-orphaned-shapes (:data file)))
([data]
(let [is-orphan? (fn [shape objects]
(and (some? (:parent-id shape))
(nil? (get objects (:parent-id shape)))))
update-page (fn [page]
(let [objects (:objects page)
orphans (set (filter #(is-orphan? % objects) (vals objects)))]
(if (seq orphans)
(do
(prn (:id data) "file has" (count orphans) "broken shapes")
(-> page
(update-shapes (fn [shape]
(if (orphans shape)
(assoc shape :parent-id uuid/zero)
shape)))
(update-in [:objects uuid/zero :shapes]
(fn [shapes] (into shapes (map :id orphans))))))
page)))]
(update-pages data update-page))))
;; DO NOT DELETE already used scripts, could be taken as templates for easyly writing new ones
;; -------------------------------------------------------------------------------------------
;; (defn repair-orphaned-components
;; "We have detected some cases of component instances that are not nested, but
;; however they have not the :component-root? attribute (so the system considers
;; them nested). This script fixes this adding them the attribute.
;;
;; Use it with the update-file function above."
;; [data]
;; (let [update-page
;; (fn [page]
;; (prn "================= Page:" (:name page))
;; (letfn [(is-nested? [object]
;; (and (some? (:component-id object))
;; (nil? (:component-root? object))))
;;
;; (is-instance? [object]
;; (some? (:shape-ref object)))
;;
;; (get-parent [object]
;; (get (:objects page) (:parent-id object)))
;;
;; (update-object [object]
;; (if (and (is-nested? object)
;; (not (is-instance? (get-parent object))))
;; (do
;; (prn "Orphan:" (:name object))
;; (assoc object :component-root? true))
;; object))]
;;
;; (update page :objects d/update-vals update-object)))]
;;
;; (update data :pages-index d/update-vals update-page)))
;; (defn check-image-shapes
;; [{:keys [data] :as file} stats]
;; (println "=> analizing file:" (:name file) (:id file))
;; (swap! stats update :total-files (fnil inc 0))
;; (let [affected? (atom false)]
;; (walk/prewalk (fn [obj]
;; (when (and (map? obj) (= :image (:type obj)))
;; (when-let [fcolor (some-> obj :fill-color str/upper)]
;; (when (or (= fcolor "#B1B2B5")
;; (= fcolor "#7B7D85"))
;; (reset! affected? true)
;; (swap! stats update :affected-shapes (fnil inc 0))
;; (println "--> image shape:" ((juxt :id :name :fill-color :fill-opacity) obj)))))
;; obj)
;; data)
;; (when @affected?
;; (swap! stats update :affected-files (fnil inc 0)))))
[app.srepl.helpers :as h]
[app.srepl.fixes :as f]))
;; Empty namespace as main entry point for Server REPL