zot: run GC after manifest removal

Clients today expect the repo to clean up if there are unused blobs, not to
manually delete things they think are unused. Let's do that, and use
umoci's code to do it since it's tested and works.

v2: also run GC on update as well as delete

v3: fix up error return paths needing two args

Signed-off-by: Serge Hallyn <shallyn@cisco.com>
Signed-off-by: Tycho Andersen <tycho@tycho.ws>

go.mod

@@ -15,6 +15,7 @@ require (
 	github.com/mitchellh/mapstructure v1.1.2
 	github.com/nmcclain/asn1-ber v0.0.0-20170104154839-2661553a0484 // indirect
 	github.com/nmcclain/ldap v0.0.0-20191021200707-3b3b69a7e9e3
+	github.com/openSUSE/umoci v0.4.5
 	github.com/opencontainers/distribution-spec v1.0.0-rc0
 	github.com/opencontainers/go-digest v1.0.0-rc1
 	github.com/opencontainers/image-spec v1.0.1

go.sum

@@ -12,7 +12,15 @@ github.com/alecthomas/template v0.0.0-20160405071501-a0175ee3bccc/go.mod h1:LOuy
 github.com/alecthomas/template v0.0.0-20190718012654-fb15b899a751 h1:JYp7IbQjafoB+tBA3gMyHYHrpOtNuDiK/uB5uXxq5wM=
 github.com/alecthomas/template v0.0.0-20190718012654-fb15b899a751/go.mod h1:LOuyumcjzFXgccqObfd/Ljyb9UuFJ6TxHnclSeseNhc=
 github.com/alecthomas/units v0.0.0-20151022065526-2efee857e7cf/go.mod h1:ybxpYRFXyAe+OPACYpWeL0wqObRcbAqCMya13uyzqw0=
+github.com/apex/log v1.1.1 h1:BwhRZ0qbjYtTob0I+2M+smavV0kOC8XgcnGZcyL9liA=
+github.com/apex/log v1.1.1/go.mod h1:Ls949n1HFtXfbDcjiTTFQqkVUrte0puoIBfO3SVgwOA=
+github.com/aphistic/golf v0.0.0-20180712155816-02c07f170c5a/go.mod h1:3NqKYiepwy8kCu4PNA+aP7WUV72eXWJeP9/r3/K9aLE=
+github.com/aphistic/sweet v0.2.0/go.mod h1:fWDlIh/isSE9n6EPsRmC0det+whmX6dJid3stzu0Xys=
+github.com/aphistic/sweet v0.3.0/go.mod h1:fWDlIh/isSE9n6EPsRmC0det+whmX6dJid3stzu0Xys=
 github.com/armon/consul-api v0.0.0-20180202201655-eb2c6b5be1b6/go.mod h1:grANhF5doyWs3UAsr3K4I6qtAmlQcZDesFNEHPZAzj8=
+github.com/aws/aws-sdk-go v1.20.6/go.mod h1:KmX6BPdI08NWTb3/sm4ZGu5ShLoqVDhKgpiN924inxo=
+github.com/aws/aws-sdk-go v1.23.21/go.mod h1:KmX6BPdI08NWTb3/sm4ZGu5ShLoqVDhKgpiN924inxo=
+github.com/aybabtme/rgbterm v0.0.0-20170906152045-cc83f3b3ce59/go.mod h1:q/89r3U2H7sSsE2t6Kca0lfwTK8JdoNGS/yzM/4iH5I=
 github.com/beorn7/perks v0.0.0-20180321164747-3a771d992973/go.mod h1:Dwedo/Wpr24TaqPxmxbtue+5NUziq4I4S80YR8gNf3Q=
 github.com/beorn7/perks v1.0.0/go.mod h1:KWe93zE9D1o94FZ5RNwFwVgaQK1VOXiVxmqh+CedLV8=
 github.com/cespare/xxhash v1.1.0/go.mod h1:XrSqR1VqqWfGrhpAt58auRo0WTKS1nRRg3ghfAqPWnc=
@@ -25,13 +33,22 @@ github.com/coreos/go-etcd v2.0.0+incompatible/go.mod h1:Jez6KQU2B/sWsbdaef3ED8Nz
 github.com/coreos/go-semver v0.2.0/go.mod h1:nnelYz7RCh+5ahJtPPxZlU+153eP4D4r3EedlOD2RNk=
 github.com/coreos/go-systemd v0.0.0-20190321100706-95778dfbb74e/go.mod h1:F5haX7vjVVG0kc13fIWeqUViNPyEJxv/OmvnBo0Yme4=
 github.com/coreos/pkg v0.0.0-20180928190104-399ea9e2e55f/go.mod h1:E3G3o1h8I7cfcXa63jLwjI0eiQQMgzzUDFVpN/nH/eA=
+github.com/cpuguy83/go-md2man v1.0.10 h1:BSKMNlYxDvnunlTymqtgONjNnaRV1sTpcovwwjF22jk=
 github.com/cpuguy83/go-md2man v1.0.10/go.mod h1:SmD6nW6nTyfqj6ABTjUi3V3JVMnlJmwcJI5acqYI6dE=
+github.com/cpuguy83/go-md2man/v2 v2.0.0-20190314233015-f79a8a8ca69d h1:U+s90UTSYgptZMwQh2aRr3LuazLJIa+Pg3Kc1ylSYVY=
+github.com/cpuguy83/go-md2man/v2 v2.0.0-20190314233015-f79a8a8ca69d/go.mod h1:maD7wRr/U5Z6m/iR4s+kqSMx2CaBsrgA7czyZG/E6dU=
+github.com/creack/pty v1.1.7/go.mod h1:lj5s0c3V2DBrqTV7llrYr5NG6My20zk30Fl46Y7DoTY=
+github.com/cyphar/filepath-securejoin v0.2.2 h1:jCwT2GTP+PY5nBz3c/YL5PAIbusElVrPujOBSCj8xRg=
+github.com/cyphar/filepath-securejoin v0.2.2/go.mod h1:FpkQEhXnPnOthhzymB7CGsFk2G9VLXONKD9G7QGMM+4=
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 github.com/davecgh/go-spew v1.1.1/go.mod h1:J7Y8YcW2NihsgmVo/mv3lAwl/skON4iLHjSsI+c5H38=
 github.com/dgrijalva/jwt-go v3.2.0+incompatible h1:7qlOGliEKZXTDg6OTjfoBKDXWrumCAMpl/TFQ4/5kLM=
 github.com/dgrijalva/jwt-go v3.2.0+incompatible/go.mod h1:E3ru+11k8xSBh+hMPgOLZmtrrCbhqsmaPHjLKYnJCaQ=
 github.com/dgryski/go-sip13 v0.0.0-20181026042036-e10d5fee7954/go.mod h1:vAd38F8PWV+bWy6jNmig1y/TA+kYO4g3RSRF0IAv0no=
+github.com/docker/go-units v0.4.0 h1:3uh0PgVws3nIA0Q+MwDC8yjEPf9zjRfZZWXZYDct3Tw=
+github.com/docker/go-units v0.4.0/go.mod h1:fgPhTUdO+D/Jk86RDLlptpiXQzgHJF7gydDDbaIK4Dk=
+github.com/fatih/color v1.7.0/go.mod h1:Zm6kSWBoL9eyXnKyktHP6abPY2pDugNf5KwzbycvMj4=
 github.com/fsnotify/fsnotify v1.4.7 h1:IXs+QLmnXW2CcXuY+8Mzv/fWEsPGWxqefPtCP5CnV9I=
 github.com/fsnotify/fsnotify v1.4.7/go.mod h1:jwhsz4b93w/PPRr/qN1Yymfu8t87LnFCMoQvtojpjFo=
 github.com/getlantern/deepcopy v0.0.0-20160317154340-7f45deb8130a h1:yU/FENpkHYISWsQrbr3pcZOBj0EuRjPzNc1+dTCLu44=
@@ -71,9 +88,12 @@ github.com/golang/groupcache v0.0.0-20190129154638-5b532d6fd5ef/go.mod h1:cIg4er
 github.com/golang/mock v1.1.1/go.mod h1:oTYuIxOrZwtPieC+H1uAHpcLFnEyAGVDL/k47Jfbm0A=
 github.com/golang/protobuf v1.2.0/go.mod h1:6lQm79b+lXiMfvg/cZm0SGofjICqVBUtrP5yJMmIC1U=
 github.com/golang/protobuf v1.3.1/go.mod h1:6lQm79b+lXiMfvg/cZm0SGofjICqVBUtrP5yJMmIC1U=
+github.com/golang/protobuf v1.3.2 h1:6nsPYzhq5kReh6QImI3k5qWzO4PEbvbIW2cwSfR/6xs=
+github.com/golang/protobuf v1.3.2/go.mod h1:6lQm79b+lXiMfvg/cZm0SGofjICqVBUtrP5yJMmIC1U=
 github.com/google/btree v1.0.0/go.mod h1:lNA+9X1NB3Zf8V7Ke586lFgjr2dZNuvo3lPJSGZ5JPQ=
 github.com/google/go-cmp v0.2.0/go.mod h1:oXzfMopK8JAjlY9xF4vHSVASa0yLyX7SntLO5aqRK0M=
 github.com/google/gofuzz v1.0.0/go.mod h1:dBl0BpW6vV/+mYPU4Po3pmUjxk6FQPldtuIdl/M65Eg=
+github.com/google/uuid v1.1.1/go.mod h1:TIyPZe4MgqvfeYDBFedMoGGpEw/LqOeaOT+nhxU+yHo=
 github.com/gopherjs/gopherjs v0.0.0-20181017120253-0766667cb4d1 h1:EGx4pi6eqNxGaHF6qqu48+N2wcFQ5qg5FXgOdqsJ5d8=
 github.com/gopherjs/gopherjs v0.0.0-20181017120253-0766667cb4d1/go.mod h1:wJfORRmW1u3UXTncJ5qlYoELFm8eSnnEO6hX4iZ3EWY=
 github.com/gorilla/handlers v1.4.2 h1:0QniY0USkHQ1RGCLfKxeNHK9bkDHGRYGNDFBCS+YARg=
@@ -86,9 +106,12 @@ github.com/grpc-ecosystem/go-grpc-prometheus v1.2.0/go.mod h1:8NvIoxWQoOIhqOTXgf
 github.com/grpc-ecosystem/grpc-gateway v1.9.0/go.mod h1:vNeuVxBJEsws4ogUvrchl83t/GYV9WGTSLVdBhOQFDY=
 github.com/hashicorp/hcl v1.0.0 h1:0Anlzjpi4vEasTeNFn2mLJgTSwt0+6sfsiTG8qcWGx4=
 github.com/hashicorp/hcl v1.0.0/go.mod h1:E5yfLk+7swimpb2L/Alb/PJmXilQ/rhwaUYs4T20WEQ=
+github.com/hpcloud/tail v1.0.0/go.mod h1:ab1qPbhIpdTxEkNHXyeSf5vhxWSCs/tWer42PpOxQnU=
 github.com/inconshreveable/mousetrap v1.0.0 h1:Z8tu5sraLXCXIcARxBp/8cbvlwVa7Z1NHg9XEKhtSvM=
 github.com/inconshreveable/mousetrap v1.0.0/go.mod h1:PxqpIevigyE2G7u3NXJIT2ANytuPF1OarO4DADm73n8=
+github.com/jmespath/go-jmespath v0.0.0-20180206201540-c2b33e8439af/go.mod h1:Nht3zPeWKUH0NzdCt2Blrr5ys8VGpn0CEB0cQHVjt7k=
 github.com/jonboulle/clockwork v0.1.0/go.mod h1:Ii8DK3G1RaLaWxj9trq07+26W01tbo22gdxWY5EU2bo=
+github.com/jpillora/backoff v0.0.0-20180909062703-3050d21c67d7/go.mod h1:2iMrUgbbvHEiQClaW2NsSzMyGHqN+rDFqY705q49KG0=
 github.com/json-iterator/go v1.1.5/go.mod h1:+SdeFBvtyEkXs7REEP0seUULqWtbJapLOCVDaaPEHmU=
 github.com/json-iterator/go v1.1.6/go.mod h1:+SdeFBvtyEkXs7REEP0seUULqWtbJapLOCVDaaPEHmU=
 github.com/json-iterator/go v1.1.9 h1:9yzud/Ht36ygwatGx56VwCZtlI/2AD15T1X2sjSuGns=
@@ -98,11 +121,19 @@ github.com/jtolds/gls v4.20.0+incompatible/go.mod h1:QJZ7F/aHp+rZTRtaJ1ow/lLfFfV
 github.com/julienschmidt/httprouter v1.2.0/go.mod h1:SYymIcj16QtmaHHD7aYtjjsJG7VTCxuUUipMqKk8s4w=
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+github.com/klauspost/compress v1.8.3 h1:CkLseiEYMM/fRb0RIg9mXB+Iwgmle+U9KGFu+JCO4Ec=
+github.com/klauspost/compress v1.8.3/go.mod h1:RyIbtBH6LamlWaDj8nUwkbUhJ87Yi3uG0guNDohfE1A=
+github.com/klauspost/cpuid v1.2.1 h1:vJi+O/nMdFt0vqm8NZBI6wzALWdA2X+egi0ogNyrC/w=
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+github.com/klauspost/pgzip v1.2.1 h1:oIPZROsWuPHpOdMVWLuJZXwgjhrW8r1yEX8UqMyeNHM=
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 github.com/konsorten/go-windows-terminal-sequences v1.0.1/go.mod h1:T0+1ngSBFLxvqU3pZ+m/2kptfBszLMUkC4ZK/EgS/cQ=
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@@ -110,10 +141,15 @@ github.com/magiconair/properties v1.8.1 h1:ZC2Vc7/ZFkGmsVC9KvOjumD+G5lXy2RtTKyzR
 github.com/magiconair/properties v1.8.1/go.mod h1:PppfXfuXeibc/6YijjN8zIbojt8czPbwD3XqdrwzmxQ=
 github.com/mailru/easyjson v0.0.0-20180823135443-60711f1a8329 h1:2gxZ0XQIU/5z3Z3bUBu+FXuk2pFbkN6tcwi/pjyaDic=
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@@ -123,18 +159,27 @@ github.com/modern-go/concurrent v0.0.0-20180306012644-bacd9c7ef1dd/go.mod h1:6dJ
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@@ -156,15 +201,33 @@ github.com/prometheus/procfs v0.0.0-20181005140218-185b4288413d/go.mod h1:c3At6R
 github.com/prometheus/procfs v0.0.0-20190507164030-5867b95ac084/go.mod h1:TjEm7ze935MbeOT/UhFTIMYKhuLP4wbCsTZCD3I8kEA=
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@@ -182,6 +245,7 @@ github.com/spf13/viper v1.6.1 h1:VPZzIkznI1YhVMRi6vNFLHSwhnhReBfgTxIPccpfdZk=
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@@ -197,6 +261,10 @@ github.com/swaggo/http-swagger v0.0.0-20190614090009-c2865af9083e/go.mod h1:eycb
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@@ -204,6 +272,10 @@ github.com/ugorji/go/codec v0.0.0-20181022190402-e5e69e061d4f/go.mod h1:VFNgLljT
 github.com/ugorji/go/codec v0.0.0-20181204163529-d75b2dcb6bc8/go.mod h1:VFNgLljTbGfSG7qAOspJ7OScBnGdDN/yBr0sguwnwf0=
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@@ -214,11 +286,14 @@ go.uber.org/zap v1.10.0/go.mod h1:vwi/ZaCAaUcBkycHslxD9B2zi4UTXhF60s6SWpuDF0Q=
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@@ -229,13 +304,17 @@ golang.org/x/net v0.0.0-20190522155817-f3200d17e092/go.mod h1:HSz+uSET+XFnRR8LxR
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@@ -243,8 +322,12 @@ golang.org/x/sys v0.0.0-20181228144115-9a3f9b0469bb/go.mod h1:STP8DvDyc/dI5b8T5h
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@@ -258,6 +341,8 @@ golang.org/x/tools v0.0.0-20190606050223-4d9ae51c2468/go.mod h1:/rFqwRUd4F7ZHNgw
 golang.org/x/tools v0.0.0-20190611222205-d73e1c7e250b/go.mod h1:/rFqwRUd4F7ZHNgwSSTFct+R/Kf4OFW1sUzUTQQTgfc=
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+golang.org/x/tools v0.0.0-20190913181337-0240832f5c3d/go.mod h1:b+2E5dAYhXwXZwtnZ6UAqBI28+e2cm9otk0dWdXHAEo=
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@@ -267,12 +352,15 @@ gopkg.in/alecthomas/kingpin.v2 v2.2.6/go.mod h1:FMv+mEhP44yOT+4EoQTLFTRgOQ1FBLks
 gopkg.in/check.v1 v0.0.0-20161208181325-20d25e280405/go.mod h1:Co6ibVJAznAaIkqp8huTwlJQCZ016jof/cbN4VW5Yz0=
 gopkg.in/check.v1 v1.0.0-20180628173108-788fd7840127 h1:qIbj1fsPNlZgppZ+VLlY7N33q108Sa+fhmuc+sWQYwY=
 gopkg.in/check.v1 v1.0.0-20180628173108-788fd7840127/go.mod h1:Co6ibVJAznAaIkqp8huTwlJQCZ016jof/cbN4VW5Yz0=
+gopkg.in/check.v1 v1.0.0-20190902080502-41f04d3bba15/go.mod h1:Co6ibVJAznAaIkqp8huTwlJQCZ016jof/cbN4VW5Yz0=
+gopkg.in/fsnotify.v1 v1.4.7/go.mod h1:Tz8NjZHkW78fSQdbUxIjBTcgA1z1m8ZHf0WmKUhAMys=
 gopkg.in/go-playground/assert.v1 v1.2.1/go.mod h1:9RXL0bg/zibRAgZUYszZSwO/z8Y/a8bDuhia5mkpMnE=
 gopkg.in/go-playground/validator.v8 v8.18.2/go.mod h1:RX2a/7Ha8BgOhfk7j780h4/u/RRjR0eouCJSH80/M2Y=
 gopkg.in/ini.v1 v1.51.0 h1:AQvPpx3LzTDM0AjnIRlVFwFFGC+npRopjZxLJj6gdno=
 gopkg.in/ini.v1 v1.51.0/go.mod h1:pNLf8WUiyNEtQjuu5G5vTm06TEv9tsIgeAvK8hOrP4k=
 gopkg.in/resty.v1 v1.12.0 h1:CuXP0Pjfw9rOuY6EP+UvtNvt5DSqHpIxILZKT/quCZI=
 gopkg.in/resty.v1 v1.12.0/go.mod h1:mDo4pnntr5jdWRML875a/NmxYqAlA73dVijT2AXvQQo=
+gopkg.in/tomb.v1 v1.0.0-20141024135613-dd632973f1e7/go.mod h1:dt/ZhP58zS4L8KSrWDmTeBkI65Dw0HsyUHuEVlX15mw=
 gopkg.in/yaml.v2 v2.0.0-20170812160011-eb3733d160e7/go.mod h1:JAlM8MvJe8wmxCU4Bli9HhUf9+ttbYbLASfIpnQbh74=
 gopkg.in/yaml.v2 v2.2.1/go.mod h1:hI93XBmqTisBFMUTm0b8Fm+jr3Dg1NNxqwp+5A1VGuI=
 gopkg.in/yaml.v2 v2.2.2/go.mod h1:hI93XBmqTisBFMUTm0b8Fm+jr3Dg1NNxqwp+5A1VGuI=

pkg/storage/storage.go

@@ -1,6 +1,7 @@
 package storage
 
 import (
+	"context"
 	"crypto/sha256"
 	"encoding/json"
 	"fmt"
@@ -16,6 +17,7 @@ import (
 	guuid "github.com/gofrs/uuid"
 	godigest "github.com/opencontainers/go-digest"
 	ispec "github.com/opencontainers/image-spec/specs-go/v1"
+	"github.com/openSUSE/umoci"
 	"github.com/rs/zerolog"
 )
 
@@ -435,6 +437,16 @@ func (is *ImageStore) PutImageManifest(repo string, reference string, mediaType
 		return "", err
 	}
 
+	oci, err := umoci.OpenLayout(dir)
+	if err != nil {
+		return "", err
+	}
+	defer oci.Close()
+
+	if err := oci.GC(context.Background()); err != nil {
+		return "", err
+	}
+
 	return desc.Digest.String(), nil
 }
 
@@ -502,6 +514,16 @@ func (is *ImageStore) DeleteImageManifest(repo string, reference string) error {
 		return err
 	}
 
+	oci, err := umoci.OpenLayout(dir)
+	if err != nil {
+		return err
+	}
+	defer oci.Close()
+
+	if err := oci.GC(context.Background()); err != nil {
+		return err
+	}
+
 	p := path.Join(dir, "blobs")
 	p = path.Join(p, digest.Algorithm().String())
 	p = path.Join(p, digest.Encoded())

pkg/storage/storage_test.go

@@ -135,8 +135,6 @@ func TestAPIs(t *testing.T) {
 					So(err, ShouldNotBeNil)
 				})
 
-				err = il.DeleteBlob("test", d.String())
-				So(err, ShouldBeNil)
 			})
 
 			err = il.DeleteBlobUpload("test", v)